MohammadReza Fathi

A remote sensing and Ecology enthusiast
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me


I hold a master's degree in remote sensing from K.N. Toosi University of Technology. My passion lies in leveraging remote sensing technologies and datasets to monitor forests, which are vital to terrestrial ecosystems and play a crucial role in resilience against climate change and biodiversity loss. I am particularly focused on utilizing open-source datasets and applying physical models to address environmental challenges.







“All models are wrong, some are useful.” -George E.P. Box

Programming Skills

I have experience working with R in conducting geospatial analysis; however, my primary language of interest is Python, in which I possess great expertise relevant to my field. Additionally, I am completely familiar with leveraging Google Earth Engine, especially through its Python API.


R - 70%
Python - 85%
Google Earth Engine (Python API) - 80%

Technical Skills

Linux (Ubuntu) - 75%
GIS Software (ArcGIS Pro, ENVI, QGIS, Snap) - 90%
Git & GitHub - 80%
LaTeX & TeX - 80%
Web Development (HTML, CSS) - 70%
Microsoft Office (Word, Excel, PowerPoint) - 90%


Python

Geospatial Operations Rasterio | Gdal | Geopandas | Rioxarray | Xarray | spyndex | EE | GEE | Planetary-computer
Statistics (ML & NN) Scikit-learn | TensorFlow
Data Processing NumPy | Pandas
Data Visualization Matplotlib | Seaborn | Plotly | Leaflet Map | Folium
Parallel Processing Ray | Dask
GUI / API Tkinter | ipywidgets | Streamlit | Taipy

Google Earth Engine

Time Series Analysis
Change Detection
Supervised & Unsupervised Classification
API Development (EE as Backend)
Master's Degree
MSc in Remote Sensing (2021 - 2024)
K.N. Toosi University of Technology | Tehran, Iran
Score: 17.35 out of 20 (GPA: 3.65/4)
Thesis topic: Development of a Web-based Python Application Utilizing Cumulative Sum for Temporal Analysis of Remote Sensing Data to Monitor Forest Degradation and Decline Using Google Earth Engine: A Case Study in the Hyrcanian Forests
Supervisors: Dr. Hooman Latifi & Dr. Siddhartha Khare
Advisor: Dr. Yasser Maghsoodi
Bachelor's Degree
BEng in Geomatics Engineering (2016 - 2021)
University of Bojnord | North Khorasan, Iran
Score: 16.45 out of 20 (GPA: 3.14/4)
Supervisor: Dr. Yasser Jouybri
Teacher Assistants
Teacher Assistant for an MSc course
Course: Ecological Applications of Remote Sensing for Ecosystem Monitoring - Theory & Practice
K.N. Toosi University of Technology | Tehran, Iran
Professor: Dr. Hooman Latifi
Academic Experiences
Fieldwork for Oak Charcoal Disease (OCD) in the Hyrcanian forest. (July – August 2023)
Experience in working with Very High-Resolution (VHR) datasets, including World-View 2/3, Spot 6/7, Pléiades and Pléiades Neo.
SAR dataset processing and applications in forestry, with a focus on SAR Sentinel-1 indices and interferograms for vegetation monitoring.
Integrated environmental datasets, such as ERA5, Landsat LST, SRTM, NASADEM, and Copernicus DEM, to enhance environmental analysis in remote sensing projects.
Publications
Fathi, M. R., Latifi, H., Gholizadeh, H., & Khare, S. (2024). PaRaVis: An automatic Python graphical package for ensemble analysis of plant beta diversity using remote sensing proxies. Ecological Informatics, 102739. https://doi.org/10.1016/j.ecoinf.2024.102739

PaRaVis (Parallel Rao's Q Visualization and Analysis) is designed to streamline the extraction of Rao's Q index from diverse vegetation indices (VIs) derived from remote sensing datasets. The tool is organized into three distinct sections. The first one focuses on extracting, visualizing, and allowing users to select from 75 indices. The second part is dedicated to calculating Rao’s Q index in parallel, for both unidimensional and multidimensional modes, utilizing various distance metrics. The last section is tailored to assist users in comprehensively visualizing and analyzing Rao’s Q index outputs through various plots and visualization tools.


PaRaVis Demo


PaRaVis

Article
Fathi, M. R., Latifi, H., Gholizadeh, H., & Khare, S. (2024). PaRaVis: An automatic Python graphical package for ensemble analysis of plant beta diversity using remote sensing proxies... https://doi.org/10.1016/j.ecoinf.2024.102739


DiTiMo (Disturbance Time-series Monitoring) is a web application designed to address the urgent need for effective monitoring of forest and terrestrial ecosystems amid rapid environmental changes and biodiversity loss. Utilizing the powerful capabilities of Google Earth Engine, DiTiMo implements a CuSum-based approach to provide precise and near real-time ecosystem monitoring. This globally accessible tool allows users worldwide to monitor ecosystems in real time, employing a variety of multispectral and radar datasets for comprehensive analysis. Additionally, DiTiMo offers tools for visualizing and downloading data at various stages of the process, making it suitable for researchers, environmentalists, and policymakers without requiring extensive hardware or programming experience.


Datasets used in DiTiMo and the number of indices considered for each data.
Name Data Type Number of Indices
Harmonized Landsat/Sentinel-2 Multispectral 123
Landsat-5/8/9 Multispectral 123
Sentinel-2 Multispectral 155
Sentinel-1 SAR 10

DiTiMo Demo


The DiTiMo tool is currently under restricted access. To request access, please complete the form below:

Hooman Latifi

Prof. Hooman Latifi

Title Associate Professor
Role MSc Primary Supervisor
Department Dept. of Photogrammetry and Remote Sensing, K.N.Toosi University of Technology: Tehran, IR
Email hooman.latifi@kntu.ac.ir
Title Associate Professor
Department Dept. of Remote Sensing, University of Würzburg: Würzburg, Bayern, DE
Email hooman.latifi@uni-wuerzburg.de

Prof. Siddhartha Khare

Title Assistant Professor
Role MSc Secondary Supervisor
Department Dept. of Civil Engineering, IIT Roorkee
Additional Positions Academic Associate at Habitat, Canada
Founder of startup Bhoomicam Pvt. Ltd., India
Email siddhartha.khare@ce.iitr.ac.in
Siddhartha Khare

Prof. Yasser Maghsoudi

Title Associate Professor
Role MSc Advisor
Department Dept. of Earth and Environmental Sciences, University of Exeter, UK
Email Y.Maghsoudi-Mehrani@exeter.ac.uk
Yasser Maghsoudi

Prof. Hamed Gholizadeh

Title Associate Professor
Role Scientific Advisor
Department Dept. of Geography, Oklahoma State University, Stillwater, Oklahoma, United States
Email hamed.gholizadeh@okstate.edu
Hamed Gholizadeh

Prof. Yasser Jouybari

Title Assistant Professor
Role BEng Supervisor
Department Dept. of Engineering, University of Bojnord: North Khorasan Province, Bojnurd, IR
Email Jouybari@ub.ac.ir
Yasser Jouybari

Keep In Touch!

Thank you for visiting out my profile. If you would like to get into contact with me, please fill out the form below.

Address:

Mohammad Reza Fathi
K. N. Toosi University of Technology,
470 Mirdamad Ave. West, 19697, Tehran, Iran

Phone:

(+98) 990 060 0059